ALM08171.1 protein (Sediminicola sp. YIK13) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

ALM08171.1

Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (122 aa)

Predicted Functional Partners:

ALM08172.1

0.757

ALM08170.1

0.697

ALM08169.1

0.532

ALM08168.1

0.528

ALM09261.1

0.416

Your Current Organism:

Sediminicola sp. YIK13

NCBI taxonomy Id: 1453352
Other names: S. sp. YIK13

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ALM08168.1	ALM08169.1	SB49_10385	SB49_10390	Mannose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.791
ALM08168.1	ALM08170.1	SB49_10385	SB49_10395	Mannose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.581
ALM08168.1	ALM08171.1	SB49_10385	SB49_10400	Mannose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.528
ALM08168.1	ALM08172.1	SB49_10385	SB49_10405	Mannose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.545
ALM08169.1	ALM08168.1	SB49_10390	SB49_10385	2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Mannose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.791
ALM08169.1	ALM08170.1	SB49_10390	SB49_10395	2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.586
ALM08169.1	ALM08171.1	SB49_10390	SB49_10400	2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.532
ALM08169.1	ALM08172.1	SB49_10390	SB49_10405	2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.919
ALM08169.1	ALM09261.1	SB49_10390	SB49_10410	2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.712
ALM08170.1	ALM08168.1	SB49_10395	SB49_10385	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mannose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.581
ALM08170.1	ALM08169.1	SB49_10395	SB49_10390	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.586
ALM08170.1	ALM08171.1	SB49_10395	SB49_10400	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.697
ALM08170.1	ALM08172.1	SB49_10395	SB49_10405	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.683
ALM08171.1	ALM08168.1	SB49_10400	SB49_10385	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mannose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.528
ALM08171.1	ALM08169.1	SB49_10400	SB49_10390	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.532
ALM08171.1	ALM08170.1	SB49_10400	SB49_10395	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.697
ALM08171.1	ALM08172.1	SB49_10400	SB49_10405	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.757
ALM08171.1	ALM09261.1	SB49_10400	SB49_10410	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.416
ALM08172.1	ALM08168.1	SB49_10405	SB49_10385	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Mannose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.545
ALM08172.1	ALM08169.1	SB49_10405	SB49_10390	Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.	2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.919