STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT15_05650Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (395 aa)    
Predicted Functional Partners:
AT15_05645
Cysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.776
AT15_05655
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
AT15_07815
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.489
AT15_07620
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.462
AT15_07375
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.454
AT15_05105
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.447
AT15_07380
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.445
AT15_05385
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.423
AT15_06745
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.418
proB
Gamma-glutamyl kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.
     
 0.406
Your Current Organism:
Kosmotoga arenicorallina
NCBI taxonomy Id: 1453497
Other names: K. arenicorallina S304, Kosmotoga arenicorallina DSM 22549, Kosmotoga arenicorallina JCM 15790, Kosmotoga arenicorallina S304, Kosmotoga sp. S304
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