STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT05_00225Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (315 aa)    
Predicted Functional Partners:
AT05_00170
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.807
AT05_00980
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.790
AT05_04685
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.779
AT05_04230
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.761
AT05_04580
Von Willebrand factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.756
AT05_04590
Aerotolerance protein BatA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.722
AT05_04595
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.721
AT05_07305
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
     0.699
AT05_10785
ATPase AAA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
 
  
 0.674
AT05_00220
Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.
       0.650
Your Current Organism:
Schleiferia thermophila
NCBI taxonomy Id: 1453500
Other names: S. thermophila str. Yellowstone, Schleiferia thermophila str. Yellowstone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.