STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT05_00500Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (805 aa)    
Predicted Functional Partners:
AT05_09080
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
 0.824
AT05_00505
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.714
AT05_08785
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.650
AT05_06315
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.632
AT05_00510
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.606
AT05_09445
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.595
AT05_00495
Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.441
AT05_07220
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.436
AT05_02810
Cyanophycinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S51 family.
  
     0.409
AT05_02740
Glycoside hydrolase family 31; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.
  
     0.402
Your Current Organism:
Schleiferia thermophila
NCBI taxonomy Id: 1453500
Other names: S. thermophila str. Yellowstone, Schleiferia thermophila str. Yellowstone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.