STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT05_03605Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology. (473 aa)    
Predicted Functional Partners:
AT05_08170
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 0.750
AT05_04645
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.708
AT05_05480
Bifunctional cbb3-type cytochrome C oxidase subunit I/II; CcoN/CcoO FixN/FixO; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.
   
  0.652
AT05_07865
Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.
    
  0.647
AT05_07060
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.642
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.638
AT05_05810
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
   0.568
AT05_03600
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
       0.565
AT05_07930
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.549
AT05_03610
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the P-Pant transferase superfamily.
       0.542
Your Current Organism:
Schleiferia thermophila
NCBI taxonomy Id: 1453500
Other names: S. thermophila str. Yellowstone, Schleiferia thermophila str. Yellowstone
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.