STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT05_04705Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)    
Predicted Functional Partners:
AT05_11625
Cytochrome C oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
    
   0.952
AT05_11630
Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the heme-copper respiratory oxidase family.
    
   0.952
AT05_04715
LemA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.912
AT05_04710
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.891
AT05_08785
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
   0.885
AT05_02895
Cytochrome oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.758
AT05_02900
Cytochrome oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.758
AT05_05490
Cytochrome C oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.736
AT05_09485
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.736
AT05_11610
Membrane protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
   0.736
Your Current Organism:
Schleiferia thermophila
NCBI taxonomy Id: 1453500
Other names: S. thermophila str. Yellowstone, Schleiferia thermophila str. Yellowstone
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.