STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_16732Coproporphyrinogen III oxidase. (146 aa)    
Predicted Functional Partners:
MNEG_3411
Uroporphyrinogen decarboxylase.
  
 0.960
MNEG_8268
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
 
 0.957
MNEG_12024
Coproporphyrinogen III oxidase.
 
     0.621
MNEG_15657
Uroporphyrinogen decarboxylase.
  
 0.598
MNEG_14778
Uroporphyrinogen decarboxylase.
  
 0.598
MNEG_13825
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
 
 0.594
MNEG_14378
Coproporphyrinogen III oxidase.
  
     0.544
MNEG_3105
Uncharacterized protein.
   
 
 0.500
MNEG_0291
Methyltransferase.
   
 
 0.500
MNEG_4884
Methyltransferase small.
   
 
 0.500
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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