STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_16521Thylakoid lumenal protein. (154 aa)    
Predicted Functional Partners:
MNEG_0869
PsbP domain-containing protein.
  
 
 0.724
MNEG_12749
60S ribosomal protein L21-2.
   
   0.684
MNEG_7257
50S ribosomal protein L2.
   
 
 0.644
MNEG_10786
60S ribosomal protein L8.
   
 
 0.642
MNEG_11788
60S ribosomal protein L13a-1.
   
   0.621
MNEG_7894
Large subunit ribosomal protein L40e.
    
  0.588
MNEG_6259
PsbP domain-containing protein 6.
  
  
 0.541
MNEG_11639
50S ribosomal protein; Belongs to the universal ribosomal protein uL13 family.
   
   0.529
MNEG_8295
Uncharacterized protein.
   
   0.529
MNEG_13078
Peptidyl-prolyl cis-trans isomerase CYP37.
  
   
 0.520
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.