STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_15221Uncharacterized protein. (287 aa)    
Predicted Functional Partners:
MNEG_4919
30S ribosomal protein S16.
  
 
 0.538
MNEG_7139
50S ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
   
 
 0.532
rps3
30S ribosomal protein S3, chloroplastic; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.532
MNEG_7257
50S ribosomal protein L2.
   
 
 0.531
MNEG_0128
Prohibitin.
   
 0.520
MNEG_15066
Elongation factor Tu.
   
  
 0.514
MNEG_5281
Prohibitin.
   
 0.512
MNEG_5803
Ribosomal biogeneis GTPase.
   
  
 0.510
MNEG_5407
Uncharacterized protein.
   
  
 0.494
MNEG_14325
Uncharacterized protein.
   
 0.493
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.