STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_14751ATP-dependent Clp protease ATP-binding subunit ClpC. (271 aa)    
Predicted Functional Partners:
MNEG_3673
Uncharacterized protein.
  
 
 0.664
MNEG_0327
ATP-dependent Clp protease adaptor protein ClpS.
  
 
 0.664
MNEG_15468
ATP-dependent Clp protease ATP-binding subunit ClpC.
 
     0.620
MNEG_9710
ATP-dependent Clp protease proteolytic subunit.
  
 
 0.614
MNEG_10330
Putative ATP-dependent Clp protease ATP-binding subunit.
 
     0.593
MNEG_11620
ATP-dependent Clp protease proteolytic subunit.
  
 
 0.582
MNEG_12622
ATP-dependent Clp protease ATP-binding subunit ClpC.
 
     0.578
MNEG_0202
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
  
 
 0.571
MNEG_13845
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
  
 
 0.570
MNEG_16664
Putative ATP-dependent Clp protease, ATP-binding protein.
 
   
 0.570
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.