STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_14520TFCD_C domain-containing protein. (715 aa)    
Predicted Functional Partners:
MNEG_11460
ADP-ribosylation factor-like protein 2; Belongs to the small GTPase superfamily. Arf family.
    
 0.894
MNEG_6669
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
  
 0.785
MNEG_12162
Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
  
  
 0.785
MNEG_8754
Putative L-lactate permease.
   
  
 0.584
MNEG_9676
Tubulin folding cofactor B.
    
 0.572
MNEG_6203
C-CAP/cofactor C-like domain-containing protein.
    
 0.568
MNEG_0224
Tubulin-specific chaperone A; Belongs to the TBCA family.
    
 0.563
MNEG_2852
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
    
 0.549
MNEG_10807
Uncharacterized protein.
   
   0.549
MNEG_5289
Tubulin epsilon chain; Belongs to the tubulin family.
    
 0.549
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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