STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_13194Uncharacterized protein. (348 aa)    
Predicted Functional Partners:
MNEG_2844
Splicing factor 3B subunit 1.
   
 0.953
MNEG_10828
Splicing factor 3A subunit 3.
   
 0.948
MNEG_8925
PHD finger-like domain-containing protein 5A.
    
 0.948
MNEG_12063
Splicing factor 3A subunit 2.
    
 0.943
MNEG_10147
Uncharacterized protein.
   
 0.940
MNEG_1658
Splicing factor 3B subunit 4.
    
 0.939
MNEG_14342
Small nuclear ribonucleoprotein B and B.
    
 0.937
MNEG_3900
Splicing factor subunit; Belongs to the SF3B5 family.
    
 0.936
MNEG_7447
U2 small nuclear ribonucleoprotein A.
    
 0.927
MNEG_8037
U1 small nuclear ribonucleoprotein A.
   
 0.925
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.