STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_13085Signal peptide peptidase SppA, 67K type. (215 aa)    
Predicted Functional Partners:
MNEG_5195
Triosephosphate isomerase (TIM).
  
 0.828
MNEG_4321
Triosephosphate isomerase (TIM).
  
 0.828
MNEG_12175
Enolase.
  
 
 0.689
MNEG_7542
Enolase.
  
 
 0.689
MNEG_10533
Enolase.
  
 
 0.689
MNEG_7901
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily.
     
 0.687
MNEG_15590
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.683
MNEG_10743
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.683
MNEG_5468
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.683
MNEG_4350
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.683
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.