STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_12649Rab-GAP TBC domain-containing protein. (162 aa)    
Predicted Functional Partners:
MNEG_1194
WD repeat-containing protein 90.
    
   0.702
MNEG_12279
WD repeat-containing protein 90.
    
   0.702
MNEG_7928
Small GTPase.
    
 0.691
MNEG_1775
Serine/threonine-protein kinase plk-3.
    
 
 0.666
MNEG_7230
Ubiquitin-like domain-containing protein.
    
 
 0.550
MNEG_10042
Flagella associated protein.
    
   0.468
MNEG_0432
Putative Parkin coregulated like protein.
   
   0.461
MNEG_5263
Uncharacterized protein.
    
   0.440
MNEG_9980
Mitotic spindle assembly checkpoint protein MAD2A.
    
 
 0.440
MNEG_1369
Protein phosphatase.
    
 
 0.424
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.