STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_11679VOC domain-containing protein. (827 aa)    
Predicted Functional Partners:
MNEG_6032
TATA-box-binding protein.
    
 0.768
MNEG_13126
Uncharacterized protein.
    
 0.741
MNEG_7573
Uncharacterized protein.
    
 0.739
MNEG_9763
Uncharacterized protein.
    
 0.719
MNEG_7835
DNA-directed RNA polymerases I, II, and III subunit RPABC3; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
   
 
  0.661
MNEG_11305
Uncharacterized protein.
   
 
 0.620
MNEG_16649
DNA excision repair protein ERCC-3.
  
 
  0.620
MNEG_3029
RPA43_OB domain-containing protein.
     
 0.620
MNEG_11745
Cyclin-dependent kinase 20; Belongs to the protein kinase superfamily.
    
 0.619
MNEG_15246
Cyclin-dependent kinase 7; Belongs to the protein kinase superfamily.
    
 0.619
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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