STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_10381Uncharacterized protein. (1152 aa)    
Predicted Functional Partners:
MNEG_0644
ANK_REP_REGION domain-containing protein.
    
 0.691
MNEG_3527
E3 ubiquitin-protein ligase.
    
 0.536
MNEG_7599
Putative Bardet-Biedl syndrome 2 protein like protein.
    
 0.521
MNEG_3162
Putative Bardet-Biedl syndrome 7 like protein.
    
 0.506
MNEG_4282
Putative Tetratricopeptide repeat protein 8.
    
  0.497
MNEG_4176
RING-box protein 1.
    
 0.473
MNEG_2254
Protein PTHB1.
    
 0.466
MNEG_2253
Uncharacterized protein.
    
 0.466
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.