STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_10177Vacuolar protein sorting-associated protein 4. (123 aa)    
Predicted Functional Partners:
MNEG_10178
Vacuolar protein sorting-associating protein 4B; Belongs to the AAA ATPase family.
 
     0.948
MNEG_7121
Charged multivesicular body protein 6.
    
 0.936
MNEG_1095
Uncharacterized protein.
   
 0.934
MNEG_16739
Vta1_C domain-containing protein.
   
 0.895
MNEG_14730
Vacuolar protein sorting-associated protein VTA1.
   
 0.895
MNEG_6039
Uncharacterized protein.
    
 0.892
MNEG_4597
Charged multivesicular body protein 2A.
    
 0.892
MNEG_15490
Charged multivesicular body protein 1.
   
 0.889
MNEG_1483
Charged multivesicular body protein 5.
   
 0.813
MNEG_8788
Uncharacterized protein.
    
 0.785
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.