STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_7701Phosphoinositide-3-kinase, regulatory subunit 4. (122 aa)    
Predicted Functional Partners:
MNEG_6643
Beclin-1-like protein.
    
 0.928
MNEG_12244
Uncharacterized protein.
    
 0.899
MNEG_14320
VPS34-like PI-3-kinase; Belongs to the PI3/PI4-kinase family.
   
 0.867
MNEG_11514
Phosphatidylinositol 3-kinase; Belongs to the PI3/PI4-kinase family.
   
 0.867
MNEG_8993
Autophagy-related protein 3.
     
 0.708
MNEG_16014
WD_REPEATS_REGION domain-containing protein.
     
 0.706
MNEG_10336
Autophagy protein 5; Required for autophagy.
     
 0.706
MNEG_7192
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle. Belongs to the ATG9 family.
     
 0.704
MNEG_9291
Uncharacterized protein.
     
 0.638
MNEG_2141
WD repeat domain phosphoinositide-interacting protein 2.
     
 0.638
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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