STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_7123Aminotran_1_2 domain-containing protein. (196 aa)    
Predicted Functional Partners:
MNEG_7901
Probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1; In the N-terminal section; belongs to the aldolase class II family. MtnB subfamily.
  
  
 0.598
MNEG_15705
Diaminopimelate epimerase.
  
 0.525
MNEG_13918
Aspartate kinase.
  
 
 0.524
MNEG_16122
Uncharacterized protein.
  
 
 0.524
MNEG_15725
Aminotran_1_2 domain-containing protein.
 
     0.520
MNEG_10629
5-methyl thioribose kinase-related protein.
  
  
 0.519
MNEG_3269
Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P). Belongs to the eIF-2B alpha/beta/delta subunits family. MtnA subfamily.
  
  
 0.519
MNEG_1533
Arogenate dehydrogenase 2.
    
 0.513
MNEG_8319
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase.
  
 
 0.494
MNEG_4761
1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase.
  
 
 0.494
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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