STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_6310Squalene monooxygenase. (573 aa)    
Predicted Functional Partners:
MNEG_3837
Farnesyl-diphosphatefarnesyltransferase.
  
 
 0.991
MNEG_3915
Sterol desaturase; Belongs to the sterol desaturase family.
   
 
 0.911
MNEG_6600
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 
 0.911
MNEG_5826
NAD(P) dependent steroid dehydrogenase-like protein.
  
 
 0.869
MNEG_12174
dTDP-4-dehydrorhamnose reductase.
   
 
 0.840
MNEG_16639
Cycloartenol synthase.
  
 
 0.826
MNEG_13354
Lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase).
  
 
 0.801
MNEG_16401
Cytochrome P450, family 51 (Sterol14-demethylase); Belongs to the cytochrome P450 family.
  
 0.793
MNEG_15715
Cycloartenol synthase.
  
 
 0.780
MNEG_12081
Phytoene synthase.
   
 
 0.773
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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