STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_6276Uncharacterized protein. (252 aa)    
Predicted Functional Partners:
MNEG_8340
BZIP domain-containing protein.
    
 
 0.784
MNEG_5586
SAGA-associated factor 11.
    
 
 0.776
MNEG_14255
Uncharacterized protein.
   
 
 0.766
MNEG_0603
Uncharacterized protein.
    
 
 0.757
MNEG_0683
Transcription initiation factor TFIID subunit12.
    
 
 0.756
MNEG_7796
Transcriptional adapter ADA2.
    
 
 0.627
MNEG_12304
Transformation/transcription domain-associated protein.
   
 
 0.624
MNEG_15703
Uncharacterized protein.
   
 
 0.624
MNEG_3900
Splicing factor subunit; Belongs to the SF3B5 family.
    
   0.559
MNEG_12320
USP domain-containing protein; Belongs to the peptidase C19 family.
    
   0.542
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.