STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_5448RuvB-like helicase. (86 aa)    
Predicted Functional Partners:
MNEG_4791
RuvB-like helicase; Belongs to the RuvB family.
  
 0.992
MNEG_0411
YL1_C domain-containing protein.
    
 0.954
MNEG_4426
Actin-related protein 5; Belongs to the actin family.
    
 0.952
MNEG_0450
DNA methyltransferase 1-associated protein.
   
 0.947
MNEG_11882
Uncharacterized protein.
    
 0.943
MNEG_14357
RPAP3_C domain-containing protein.
    
 0.943
MNEG_9649
YL1_C domain-containing protein.
    
 0.940
MNEG_1178
Actin-related protein 4.
   
 0.935
MNEG_1180
Actin-related protein 4; Belongs to the actin family.
   
 0.935
MNEG_0786
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.920
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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