MNEG_15915 protein (Monoraphidium neglectum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MNEG_15915

Adenosylmethionine-8-amino-7-oxononanoateaminotransferase. (236 aa)

Predicted Functional Partners:

MNEG_5123

0.888

MNEG_5668

0.846

MNEG_2778

0.827

MNEG_0962

0.806

MNEG_11984

0.781

MNEG_16416

0.772

MNEG_2872

0.772

MNEG_10347

0.694

MNEG_13841

0.694

MNEG_3913

0.687

Your Current Organism:

Monoraphidium neglectum

NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MNEG_0962	MNEG_10347	A0A0D2K9Q6	A0A0D2KPU5	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	Argininosuccinate synthase.	0.938
MNEG_0962	MNEG_11984	A0A0D2K9Q6	A0A0D2KJH0	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	0.992
MNEG_0962	MNEG_13841	A0A0D2K9Q6	A0A0D2LXA1	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	Argininosuccinate synthase.	0.938
MNEG_0962	MNEG_15915	A0A0D2K9Q6	A0A0D2K783	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	Adenosylmethionine-8-amino-7-oxononanoateaminotransferase.	0.806
MNEG_0962	MNEG_16416	A0A0D2K9Q6	A0A0D2K5V3	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	Uncharacterized protein.	0.978
MNEG_0962	MNEG_2778	A0A0D2K9Q6	A0A0D2LET9	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	Argininosuccinate lyase.	0.990
MNEG_0962	MNEG_2872	A0A0D2K9Q6	A0A0D2NJQ0	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	Acetylglutamate kinase.	0.999
MNEG_0962	MNEG_5123	A0A0D2K9Q6	A0A0D2L7K4	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	Delta-1-pyrroline-5-carboxylate synthetase.	0.713
MNEG_0962	MNEG_5668	A0A0D2K9Q6	A0A0D2N9E6	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	N-acetyl-gamma-glutamyl-phosphatereductase.	0.999
MNEG_10347	MNEG_0962	A0A0D2KPU5	A0A0D2K9Q6	Argininosuccinate synthase.	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	0.938
MNEG_10347	MNEG_11984	A0A0D2KPU5	A0A0D2KJH0	Argininosuccinate synthase.	Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	0.980
MNEG_10347	MNEG_13841	A0A0D2KPU5	A0A0D2LXA1	Argininosuccinate synthase.	Argininosuccinate synthase.	0.952
MNEG_10347	MNEG_15915	A0A0D2KPU5	A0A0D2K783	Argininosuccinate synthase.	Adenosylmethionine-8-amino-7-oxononanoateaminotransferase.	0.694
MNEG_10347	MNEG_16416	A0A0D2KPU5	A0A0D2K5V3	Argininosuccinate synthase.	Uncharacterized protein.	0.871
MNEG_10347	MNEG_2778	A0A0D2KPU5	A0A0D2LET9	Argininosuccinate synthase.	Argininosuccinate lyase.	0.987
MNEG_10347	MNEG_2872	A0A0D2KPU5	A0A0D2NJQ0	Argininosuccinate synthase.	Acetylglutamate kinase.	0.873
MNEG_10347	MNEG_5123	A0A0D2KPU5	A0A0D2L7K4	Argininosuccinate synthase.	Delta-1-pyrroline-5-carboxylate synthetase.	0.730
MNEG_10347	MNEG_5668	A0A0D2KPU5	A0A0D2N9E6	Argininosuccinate synthase.	N-acetyl-gamma-glutamyl-phosphatereductase.	0.939
MNEG_11984	MNEG_0962	A0A0D2KJH0	A0A0D2K9Q6	Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	Arginine biosynthesis bifunctional protein ArgJ, chloroplastic; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of acetylglutamate from glutamate and acetyl-CoA, and of ornithine by transacetylation between acetylornithine and glutamate.	0.992
MNEG_11984	MNEG_10347	A0A0D2KJH0	A0A0D2KPU5	Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.	Argininosuccinate synthase.	0.980