STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_15300Uncharacterized protein. (465 aa)    
Predicted Functional Partners:
MNEG_6986
Skp1 domain-containing protein.
    
 
 0.844
MNEG_0264
SKP1-like protein 1A; Belongs to the SKP1 family.
    
 
 0.844
MNEG_16596
V-type H+-transporting ATPase subunit B.
    
 
 0.805
MNEG_8035
V-type H+-transporting ATPase subunit B.
    
 
 0.805
MNEG_8085
Uncharacterized protein.
    
 
 0.805
MNEG_1463
V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
    
 
 0.795
MNEG_14721
V-type H+-transporting ATPase subunit E.
    
 
 0.767
MNEG_14142
V-type H+-transporting ATPase subunit E.
    
 
 0.767
MNEG_4418
V-type proton ATPase subunit a; Essential component of the vacuolar proton pump (V-ATPase), a multimeric enzyme that catalyzes the translocation of protons across the membranes. Required for assembly and activity of the V-ATPase.
   
 
 0.599
MNEG_5462
V-type H+-transporting ATPase 54 kD subunit.
    
 
 0.526
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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