STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_15265Structural maintenance of chromosomes protein 1. (249 aa)    
Predicted Functional Partners:
MNEG_6000
Structural maintenance of chromosomes protein 3.
   
 0.974
MNEG_12446
Double-strand-break repair-like protein rad21.
   
 0.950
MNEG_2192
DNA polymerase eta subunit.
  
 0.943
MNEG_1775
Serine/threonine-protein kinase plk-3.
   
 0.933
MNEG_7718
Rad21_Rec8 domain-containing protein.
   
 0.925
MNEG_13681
Uncharacterized protein.
   
 0.925
MNEG_7715
Cnd3 domain-containing protein.
   
 0.907
MNEG_13637
Chromosome condensation complex condensin, subunit H.
   
 0.886
MNEG_11166
WAPL domain-containing protein.
   
 0.853
MNEG_13217
Uncharacterized protein.
   
 0.845
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.