STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_060760S ribosomal protein L27. (52 aa)    
Predicted Functional Partners:
MNEG_9356
Putative 60S ribosomal protein L14.
   
 0.994
MNEG_3250
Uncharacterized protein.
   
 0.994
MNEG_7822
60S ribosomal protein L26-1.
  
 0.994
MNEG_10786
60S ribosomal protein L8.
  
 0.993
MNEG_5701
60S ribosomal protein L28-1.
   
 0.993
MNEG_0549
60S ribosomal protein L4.
  
 0.993
MNEG_7391
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 0.993
MNEG_11623
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
  
 0.993
MNEG_11177
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 0.993
MNEG_8058
60S ribosomal protein L31.
   
 0.993
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.