STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_148293-ketoacyl-CoA synthase 5. (206 aa)    
Predicted Functional Partners:
MNEG_7077
3-ketoacyl-CoA synthase 17.
 
     0.638
MNEG_6070
3-ketoacyl-CoA synthase 19.
 
     0.585
MNEG_6733
3-ketoacyl-CoA synthase 4.
 
     0.541
MNEG_12088
3-ketoacyl-CoA synthase 19.
 
     0.538
MNEG_15542
3-ketoacyl-CoA synthase 1.
 
     0.537
MNEG_11436
3-ketoacyl-CoA synthase 19.
 
     0.535
MNEG_11437
3-ketoacyl-CoA synthase 9.
  
     0.532
MNEG_12140
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]
    
 
 0.495
MNEG_5026
Enoyl reductase.
    
 
 0.440
MNEG_5682
TPR_REGION domain-containing protein.
   
 0.422
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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