STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_13059RRM domain-containing protein. (151 aa)    
Predicted Functional Partners:
MNEG_13319
Uncharacterized protein.
   
 0.998
MNEG_11067
Translation initiation factor eIF-4A 3.
   
 0.997
MNEG_5945
Uncharacterized protein.
    
 0.994
MNEG_9508
Nuclear cap-binding protein subunit 2.
   
 0.969
MNEG_0605
Uncharacterized protein.
   
 0.968
MNEG_6163
Uncharacterized protein.
   
 0.959
MNEG_13697
Pre-mRNA-processing factor SLU7.
   
 0.949
MNEG_16100
THO complex subunit 4.
   
 0.934
MNEG_1489
THO complex subunit 4.
   
 0.934
MNEG_12347
Uncharacterized protein.
    
 0.921
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.