STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_12904Uncharacterized protein. (241 aa)    
Predicted Functional Partners:
MNEG_8072
Histone-lysine N-methyltransferase ash1.
  
 
0.922
MNEG_5534
SET domain-containing protein.
     
 0.901
MNEG_8734
Uncharacterized protein.
     
 0.901
MNEG_13982
Histone-lysine n-methyltransferase, suvh, putative.
     
 
0.900
MNEG_7894
Large subunit ribosomal protein L40e.
    
  0.644
MNEG_1934
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
   
 0.596
MNEG_13406
Putative sirtuin (Silent mating type information regulation 2 like protein) 5.
    
 0.581
MNEG_4212
Deacetylase sirtuin-type domain-containing protein.
    
 0.581
MNEG_8369
Uncharacterized protein.
    
 0.563
MNEG_3702
Polycomb group protein FERTILIZATION-INDEPENDENT ENDOSPERM.
    
 0.562
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.