STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_11779Putative Cell division cycle protein 16. (469 aa)    
Predicted Functional Partners:
MNEG_0352
Anaphase-promoting complex subunit 8.
  
 0.990
MNEG_5228
Uncharacterized protein.
    
 0.982
MNEG_9980
Mitotic spindle assembly checkpoint protein MAD2A.
    
 0.974
MNEG_15156
Anaphase-promoting complex subunit 1.
   
 0.959
MNEG_12428
WD_REPEATS_REGION domain-containing protein.
   
 0.959
MNEG_9393
ANAPC4 domain-containing protein.
   
 0.959
MNEG_2219
Uncharacterized protein.
   
 0.959
MNEG_3729
Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family.
   
 0.958
MNEG_11979
ANAPC5 domain-containing protein.
   
 0.957
MNEG_9758
Uncharacterized protein.
   
 0.957
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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