STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_11348Beta_helix domain-containing protein. (285 aa)    
Predicted Functional Partners:
MNEG_6986
Skp1 domain-containing protein.
    
 0.878
MNEG_0264
SKP1-like protein 1A; Belongs to the SKP1 family.
    
 0.878
MNEG_7296
Cullin 3; Belongs to the cullin family.
    
 0.627
MNEG_9347
Cullin-1; Belongs to the cullin family.
    
 0.627
MNEG_3746
Cullin_Nedd8 domain-containing protein.
    
 0.627
MNEG_4176
RING-box protein 1.
    
  0.592
MNEG_6166
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.572
MNEG_10329
NEDD8-activating enzyme E1 regulatory subunit.
    
  0.563
MNEG_14161
Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity.
   
 
  0.561
MNEG_1032
COP9 signalosome complex subunit 5.
    
  0.559
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.