Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MNEG_0306 | MNEG_10680 | A0A0D2NU59 | A0A0D2KNR2 | DNA-directed RNA polymerases I, II, and III subunit RPABC5. | Heterogeneous nuclear ribonucleoprotein Q. | 0.520 |
MNEG_0306 | MNEG_11482 | A0A0D2NU59 | A0A0D2M5D9 | DNA-directed RNA polymerases I, II, and III subunit RPABC5. | RNA-binding protein EWS. | 0.610 |
MNEG_0306 | MNEG_12639 | A0A0D2NU59 | A0A0D2LUL0 | DNA-directed RNA polymerases I, II, and III subunit RPABC5. | DNA-directed RNA polymerase II subunit RPB3-A. | 0.995 |
MNEG_0306 | MNEG_14974 | A0A0D2NU59 | A0A0D2LMF3 | DNA-directed RNA polymerases I, II, and III subunit RPABC5. | DNA-directed RNA polymerase II subunit B. | 0.956 |
MNEG_0306 | MNEG_2692 | A0A0D2NU59 | A0A0D2NKE6 | DNA-directed RNA polymerases I, II, and III subunit RPABC5. | DNA-directed RNA polymerases I, II, and III subunit RPABC4. | 0.996 |
MNEG_0306 | MNEG_9508 | A0A0D2NU59 | A0A0D2MCA2 | DNA-directed RNA polymerases I, II, and III subunit RPABC5. | Nuclear cap-binding protein subunit 2. | 0.684 |
MNEG_0306 | rpoC2 | A0A0D2NU59 | A0A0D2NV92 | DNA-directed RNA polymerases I, II, and III subunit RPABC5. | DNA-directed RNA polymerase subunit beta'; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.956 |
MNEG_10680 | MNEG_0306 | A0A0D2KNR2 | A0A0D2NU59 | Heterogeneous nuclear ribonucleoprotein Q. | DNA-directed RNA polymerases I, II, and III subunit RPABC5. | 0.520 |
MNEG_10680 | MNEG_11482 | A0A0D2KNR2 | A0A0D2M5D9 | Heterogeneous nuclear ribonucleoprotein Q. | RNA-binding protein EWS. | 0.609 |
MNEG_10680 | MNEG_12639 | A0A0D2KNR2 | A0A0D2LUL0 | Heterogeneous nuclear ribonucleoprotein Q. | DNA-directed RNA polymerase II subunit RPB3-A. | 0.527 |
MNEG_10680 | MNEG_14974 | A0A0D2KNR2 | A0A0D2LMF3 | Heterogeneous nuclear ribonucleoprotein Q. | DNA-directed RNA polymerase II subunit B. | 0.514 |
MNEG_10680 | MNEG_16729 | A0A0D2KNR2 | A0A0D2M6Y6 | Heterogeneous nuclear ribonucleoprotein Q. | Nuclear cap-binding protein subunit 1. | 0.541 |
MNEG_10680 | MNEG_2692 | A0A0D2KNR2 | A0A0D2NKE6 | Heterogeneous nuclear ribonucleoprotein Q. | DNA-directed RNA polymerases I, II, and III subunit RPABC4. | 0.541 |
MNEG_10680 | MNEG_9008 | A0A0D2KNR2 | A0A0D2MDW4 | Heterogeneous nuclear ribonucleoprotein Q. | DNA-binding protein HEXBP. | 0.553 |
MNEG_10680 | MNEG_9508 | A0A0D2KNR2 | A0A0D2MCA2 | Heterogeneous nuclear ribonucleoprotein Q. | Nuclear cap-binding protein subunit 2. | 0.570 |
MNEG_10680 | MNEG_9976 | A0A0D2KNR2 | A0A0D2MAN8 | Heterogeneous nuclear ribonucleoprotein Q. | RRM domain-containing protein. | 0.553 |
MNEG_10680 | rpoC2 | A0A0D2KNR2 | A0A0D2NV92 | Heterogeneous nuclear ribonucleoprotein Q. | DNA-directed RNA polymerase subunit beta'; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.514 |
MNEG_11482 | MNEG_0306 | A0A0D2M5D9 | A0A0D2NU59 | RNA-binding protein EWS. | DNA-directed RNA polymerases I, II, and III subunit RPABC5. | 0.610 |
MNEG_11482 | MNEG_10680 | A0A0D2M5D9 | A0A0D2KNR2 | RNA-binding protein EWS. | Heterogeneous nuclear ribonucleoprotein Q. | 0.609 |
MNEG_11482 | MNEG_12639 | A0A0D2M5D9 | A0A0D2LUL0 | RNA-binding protein EWS. | DNA-directed RNA polymerase II subunit RPB3-A. | 0.632 |
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