STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_9410Fumarate hydratase, class II. (381 aa)    
Predicted Functional Partners:
MNEG_15042
Succinate dehydrogenase (Ubiquinone)flavoprotein subunit.
 
 0.995
MNEG_7619
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 0.991
MNEG_7251
Malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.976
MNEG_4763
Malate dehydrogenase.
  
 0.976
MNEG_15954
Malate dehydrogenase.
  
 0.976
MNEG_2849
Uncharacterized protein.
  
 
 0.963
MNEG_12178
Uncharacterized protein.
  
 
 0.963
MNEG_9195
Malate dehydrogenase (Oxaloacetate-decarboxylating)(NADP+).
  
 
 0.963
MNEG_2538
Malic enzyme.
  
 
 0.963
MNEG_13466
Aspartate aminotransferase.
   
 0.930
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.