STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_8217Subunit of VPS-C complex. (783 aa)    
Predicted Functional Partners:
MNEG_9377
Vacuolar protein sorting-associated protein 41-like protein.
   
 0.860
MNEG_15749
Vacuolar protein sorting-associated like protein 41.
   
 0.860
MNEG_15942
Vacuolar protein sorting-associated like protein 11.
   
 0.858
MNEG_4497
Subunit of VPS-C complex.
   
 0.858
MNEG_14340
Pep3/Vps18/deep orange family protein.
   
 0.854
MNEG_13424
Vacuolar protein sorting-associated protein 18.
   
 0.854
MNEG_8606
Uncharacterized protein.
   
 0.837
MNEG_12623
Vacuolar protein sorting-associated protein 33; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.837
MNEG_7928
Small GTPase.
    
 
 0.811
MNEG_7388
Uncharacterized protein.
    
 
 0.794
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.