STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_8021Uncharacterized protein. (988 aa)    
Predicted Functional Partners:
MNEG_6564
Flagellar associated protein.
   
 
 0.755
MNEG_16265
ARID domain-containing protein.
    
 0.603
MNEG_1775
Serine/threonine-protein kinase plk-3.
    
 0.582
MNEG_0847
ATP-dependent helicase STH1/SNF2.
   
 0.552
MNEG_12546
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.527
MNEG_1255
Fanconi anemia, complementation group M.
    
 0.514
MNEG_12006
LSM14 domain-containing protein.
   
 
 0.496
MNEG_12639
DNA-directed RNA polymerase II subunit RPB3-A.
   
 0.473
MNEG_4426
Actin-related protein 5; Belongs to the actin family.
    
 0.447
MNEG_7225
Histone H2A; Belongs to the histone H2A family.
    
 0.434
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.