STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_7948Inner dynein arm light chain, axonemal. (253 aa)    
Predicted Functional Partners:
MNEG_0447
Coiled-coil domain-containing protein 65.
  
 
 
 0.911
MNEG_13069
Putative Growth arrest-specific protein 8 like protein.
  
 
 
 0.904
MNEG_14348
Putative Growth arrest-specific protein 8.
  
 
 
 0.903
MNEG_3019
IQ and ubiquitin-like domain-containing protein.
  
 
   0.893
MNEG_8296
Dynein light chain.
   
 
 0.872
MNEG_3440
Actin.
    
 
 0.871
MNEG_1158
Actin.
    
 
 0.871
MNEG_7834
Radial spoke protein 11.
  
 
   0.861
MNEG_0142
Coiled-coil domain-containing protein 40.
  
 
   0.857
MNEG_10026
CFAP91 domain-containing protein.
  
 
   0.853
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.