MNEG_6753 protein (Monoraphidium neglectum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MNEG_6753

Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (396 aa)

Predicted Functional Partners:

MNEG_9006

0.775

MNEG_13870

0.775

MNEG_5123

0.721

MNEG_15931

0.601

MNEG_5657

0.550

MNEG_1959

0.545

MNEG_8774

0.545

MNEG_11737

0.524

MNEG_7529

0.523

MNEG_1037

0.519

Your Current Organism:

Monoraphidium neglectum

NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MNEG_1037	MNEG_13870	A0A0D2NRH8	A0A0D2LX61	Uncharacterized protein.	AP endonuclease 2.	0.784
MNEG_1037	MNEG_5657	A0A0D2NRH8	A0A0D2L5K0	Uncharacterized protein.	Endonuclease III.	0.593
MNEG_1037	MNEG_6753	A0A0D2NRH8	A0A0D2L1K6	Uncharacterized protein.	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.	0.519
MNEG_1037	MNEG_9006	A0A0D2NRH8	A0A0D2JHX4	Uncharacterized protein.	Cystatin domain-containing protein.	0.784
MNEG_11737	MNEG_15931	A0A0D2LXU8	A0A0D2IVS9	YjeF N-terminal domain-containing protein.	Dihydrofolate reductase.	0.568
MNEG_11737	MNEG_5123	A0A0D2LXU8	A0A0D2L7K4	YjeF N-terminal domain-containing protein.	Delta-1-pyrroline-5-carboxylate synthetase.	0.529
MNEG_11737	MNEG_6753	A0A0D2LXU8	A0A0D2L1K6	YjeF N-terminal domain-containing protein.	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.	0.524
MNEG_13870	MNEG_1037	A0A0D2LX61	A0A0D2NRH8	AP endonuclease 2.	Uncharacterized protein.	0.784
MNEG_13870	MNEG_15931	A0A0D2LX61	A0A0D2IVS9	AP endonuclease 2.	Dihydrofolate reductase.	0.627
MNEG_13870	MNEG_1959	A0A0D2LX61	A0A0D2K6Q5	AP endonuclease 2.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.812
MNEG_13870	MNEG_5657	A0A0D2LX61	A0A0D2L5K0	AP endonuclease 2.	Endonuclease III.	0.867
MNEG_13870	MNEG_6753	A0A0D2LX61	A0A0D2L1K6	AP endonuclease 2.	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.	0.775
MNEG_13870	MNEG_8774	A0A0D2LX61	A0A0D2MYI2	AP endonuclease 2.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.812
MNEG_15931	MNEG_11737	A0A0D2IVS9	A0A0D2LXU8	Dihydrofolate reductase.	YjeF N-terminal domain-containing protein.	0.568
MNEG_15931	MNEG_13870	A0A0D2IVS9	A0A0D2LX61	Dihydrofolate reductase.	AP endonuclease 2.	0.627
MNEG_15931	MNEG_1959	A0A0D2IVS9	A0A0D2K6Q5	Dihydrofolate reductase.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.977
MNEG_15931	MNEG_5123	A0A0D2IVS9	A0A0D2L7K4	Dihydrofolate reductase.	Delta-1-pyrroline-5-carboxylate synthetase.	0.850
MNEG_15931	MNEG_5657	A0A0D2IVS9	A0A0D2L5K0	Dihydrofolate reductase.	Endonuclease III.	0.520
MNEG_15931	MNEG_6753	A0A0D2IVS9	A0A0D2L1K6	Dihydrofolate reductase.	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.	0.601
MNEG_15931	MNEG_7529	A0A0D2IVS9	A0A0D2KYZ4	Dihydrofolate reductase.	Methylated-DNA-protein-cysteine methyltransferase.	0.421