STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_5803Ribosomal biogeneis GTPase. (922 aa)    
Predicted Functional Partners:
MNEG_4846
SAP domain-containing protein.
  
 
 0.953
MNEG_9159
GTP-binding protein.
  
 
 0.916
MNEG_15224
Uncharacterized protein.
   
 0.881
MNEG_11533
50S ribosomal protein L24; Belongs to the universal ribosomal protein uL24 family.
    
 
 0.875
MNEG_8824
SpoU_methylase domain-containing protein.
  
 
 0.873
MNEG_11189
Uncharacterized protein.
   
 0.851
MNEG_1452
WD_REPEATS_REGION domain-containing protein.
   
 0.846
MNEG_4240
50S ribosomal protein L3-2; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.824
MNEG_6522
Uncharacterized protein.
   
 
 0.824
MNEG_15380
39S ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.822
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.