STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_5196Trans-2-enoyl-CoA reductase. (161 aa)    
Predicted Functional Partners:
MNEG_11833
Trans-2-enoyl-CoA reductase.
 
     0.793
MNEG_1995
Beta-ketoacyl synthase.
  
 0.675
MNEG_7619
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
  
 0.456
MNEG_2180
Isocitrate lyase.
   
  
 0.453
MNEG_16119
Acetaldehyde dehydrogenase / alcohol dehydrogenase.
     
 0.452
MNEG_15072
Uncharacterized protein.
     
 0.452
MNEG_12869
Uncharacterized protein.
  
 0.429
MNEG_4480
PKS_ER domain-containing protein.
  
 0.429
MNEG_14451
PKS_ER domain-containing protein.
  
 0.429
MNEG_6560
F-type H+-transporting ATPase subunit delta.
   
 0.429
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.