STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_4277Putative tubulin polyglutamylase TTLL9. (156 aa)    
Predicted Functional Partners:
MNEG_6347
Putative tubulin polyglutamylase TTLL1.
 
     0.940
MNEG_14031
Uncharacterized protein.
      
 0.600
MNEG_2229
Heat shock factor protein HSF8.
      
 0.600
MNEG_1441
NudC domain-containing protein 2.
 
      0.592
MNEG_3008
Tubulin tyrosine ligase-like family, member 6.
  
   
 0.566
MNEG_11737
YjeF N-terminal domain-containing protein.
    
 
 0.544
MNEG_6174
Putative DCP2 decapping enzyme.
    
 
 0.542
MNEG_7948
Inner dynein arm light chain, axonemal.
  
   
 0.516
MNEG_0297
Dynein_C domain-containing protein.
  
     0.466
MNEG_1892
Dynein heavy chain 1, axonemal.
  
     0.462
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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