STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_4199Phycocyanobilin:ferredoxinoxidoreductase. (561 aa)    
Predicted Functional Partners:
MNEG_4534
Heme oxygenase.
    
 0.836
MNEG_2314
Uncharacterized protein.
    
 0.836
MNEG_0399
NAD(P)-bd_dom domain-containing protein.
      
 0.667
MNEG_9717
Phosphoribosylaminoimidazolecarboxamideformyltra nsferase / IMP cyclohydrolase.
      
 0.592
MNEG_5690
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.
      
 0.592
MNEG_1759
Putative hexose phosphate transport protein.
      
 0.589
MNEG_14220
Regulatory protein uhpC.
      
 0.589
MNEG_10716
Zeta-carotene desaturase.
      
 0.503
MNEG_2924
Uncharacterized protein.
  
     0.500
MNEG_10667
Carotenoid isomerase.
      
 0.497
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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