Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MNEG_0464 | MNEG_11598 | A0A0D2NTJ7 | A0A0D2J9E1 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | RNA-binding protein 28. | 0.882 |
MNEG_0464 | MNEG_11771 | A0A0D2NTJ7 | A0A0D2MN89 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | ATP-dependent RNA helicase DOB1. | 0.777 |
MNEG_0464 | MNEG_1452 | A0A0D2NTJ7 | A0A0D2MVE3 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | WD_REPEATS_REGION domain-containing protein. | 0.974 |
MNEG_0464 | MNEG_15860 | A0A0D2NTJ7 | A0A0D2K7F1 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Putative RNA-binding protein. | 0.882 |
MNEG_0464 | MNEG_16525 | A0A0D2NTJ7 | A0A0D2M7G9 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | DSHCT domain-containing protein. | 0.777 |
MNEG_0464 | MNEG_3544 | A0A0D2NTJ7 | A0A0D2LCE6 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Putative AAA domain-containing protein. | 0.691 |
MNEG_0464 | MNEG_3768 | A0A0D2NTJ7 | A0A0D2MUL9 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | WD repeat-containing protein 74. | 0.955 |
MNEG_0464 | MNEG_8098 | A0A0D2NTJ7 | A0A0D2JKS7 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | Uncharacterized protein. | 0.459 |
MNEG_0464 | MNEG_8582 | A0A0D2NTJ7 | A0A0D2MF65 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | DEAD-box ATP-dependent RNA helicase 16. | 0.944 |
MNEG_0464 | MNEG_9013 | A0A0D2NTJ7 | A0A0D2MXK6 | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | ATP-dependent RNA helicase DOB1. | 0.777 |
MNEG_11598 | MNEG_0464 | A0A0D2J9E1 | A0A0D2NTJ7 | RNA-binding protein 28. | Nuclear/nucleolar GTPase 2; GTPase involved in pre-60S ribosomal subunit maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.882 |
MNEG_11598 | MNEG_11771 | A0A0D2J9E1 | A0A0D2MN89 | RNA-binding protein 28. | ATP-dependent RNA helicase DOB1. | 0.467 |
MNEG_11598 | MNEG_1452 | A0A0D2J9E1 | A0A0D2MVE3 | RNA-binding protein 28. | WD_REPEATS_REGION domain-containing protein. | 0.856 |
MNEG_11598 | MNEG_15860 | A0A0D2J9E1 | A0A0D2K7F1 | RNA-binding protein 28. | Putative RNA-binding protein. | 0.989 |
MNEG_11598 | MNEG_16525 | A0A0D2J9E1 | A0A0D2M7G9 | RNA-binding protein 28. | DSHCT domain-containing protein. | 0.467 |
MNEG_11598 | MNEG_3544 | A0A0D2J9E1 | A0A0D2LCE6 | RNA-binding protein 28. | Putative AAA domain-containing protein. | 0.700 |
MNEG_11598 | MNEG_3768 | A0A0D2J9E1 | A0A0D2MUL9 | RNA-binding protein 28. | WD repeat-containing protein 74. | 0.726 |
MNEG_11598 | MNEG_8098 | A0A0D2J9E1 | A0A0D2JKS7 | RNA-binding protein 28. | Uncharacterized protein. | 0.668 |
MNEG_11598 | MNEG_8582 | A0A0D2J9E1 | A0A0D2MF65 | RNA-binding protein 28. | DEAD-box ATP-dependent RNA helicase 16. | 0.903 |
MNEG_11598 | MNEG_9013 | A0A0D2J9E1 | A0A0D2MXK6 | RNA-binding protein 28. | ATP-dependent RNA helicase DOB1. | 0.467 |
page 1 of 5