STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_3529TPR_REGION domain-containing protein. (485 aa)    
Predicted Functional Partners:
MNEG_6348
Uncharacterized protein.
   
 
 0.707
MNEG_12475
Protein transport protein Sec61 subunit alpha; Belongs to the SecY/SEC61-alpha family.
   
 0.683
MNEG_13862
Protein transport protein Sec61 subunit alpha; Belongs to the SecY/SEC61-alpha family.
   
 0.683
MNEG_5039
Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.
   
 0.683
MNEG_15931
Dihydrofolate reductase.
  
  
 0.674
MNEG_3987
Tryptophan synthase alpha chain; Belongs to the TrpA family.
   
  
 0.633
MNEG_16809
ATP synthase subunit 9, mitochondrial; Belongs to the ATPase C chain family.
  
 
 0.609
MNEG_11006
50S ribosomal protein L7/L12.
   
   0.607
MNEG_11862
Uncharacterized protein.
  
 
 0.584
MNEG_10096
Uncharacterized protein.
   
 
 0.584
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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