STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_3143Uncharacterized protein. (541 aa)    
Predicted Functional Partners:
MNEG_10301
4-hydroxy-3-methylbut-2-enyl diphosphatereductase.
  
  
 0.825
MNEG_7292
Cytidylate kinase.
    
 0.823
MNEG_12472
Uncharacterized protein.
 
     0.716
MNEG_15340
4-hydroxy-3-methylbut-2-enyl diphosphatereductase.
     
 0.706
MNEG_12980
Diphosphocytidyl-2-C-methyl-D-erythritol kinase.
 
   
 0.696
MNEG_12636
Uncharacterized protein.
    
 0.660
MNEG_3023
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
    
 0.660
MNEG_2012
1-deoxy-D-xylulose-5-phosphate reductoisomerase.
  
  
 0.651
MNEG_0354
Uncharacterized protein.
  
   
 0.638
MNEG_5123
Delta-1-pyrroline-5-carboxylate synthetase.
     
 0.634
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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