MNEG_2921 protein (Monoraphidium neglectum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

MNEG_2921

Guanylate cyclase domain-containing protein. (1498 aa)

Predicted Functional Partners:

MNEG_0697

0.775

MNEG_4323

0.686

MNEG_1975

0.686

MNEG_0552

0.507

MNEG_8792

0.507

MNEG_9659

0.489

MNEG_9658

0.489

MNEG_9399

0.489

MNEG_1852

0.453

MNEG_15223

0.453

Your Current Organism:

Monoraphidium neglectum

NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
MNEG_0552	MNEG_0697	A0A0D2KAY5	A0A0D2KAF1	Uncharacterized protein.	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	0.992
MNEG_0552	MNEG_1975	A0A0D2KAY5	A0A0D2MTT9	Uncharacterized protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.978
MNEG_0552	MNEG_2921	A0A0D2KAY5	A0A0D2LED1	Uncharacterized protein.	Guanylate cyclase domain-containing protein.	0.507
MNEG_0552	MNEG_4323	A0A0D2KAY5	A0A0D2JYL5	Uncharacterized protein.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.978
MNEG_0552	MNEG_9399	A0A0D2KAY5	A0A0D2MW87	Uncharacterized protein.	T-complex protein 1 subunit beta; Belongs to the TCP-1 chaperonin family.	0.972
MNEG_0552	MNEG_9658	A0A0D2KAY5	A0A0D2MBR2	Uncharacterized protein.	T-complex protein 1 subunit beta.	0.972
MNEG_0552	MNEG_9659	A0A0D2KAY5	A0A0D2JFQ6	Uncharacterized protein.	T-complex protein 1 subunit beta; Belongs to the TCP-1 chaperonin family.	0.972
MNEG_0697	MNEG_0552	A0A0D2KAF1	A0A0D2KAY5	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	Uncharacterized protein.	0.992
MNEG_0697	MNEG_1975	A0A0D2KAF1	A0A0D2MTT9	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.992
MNEG_0697	MNEG_2921	A0A0D2KAF1	A0A0D2LED1	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	Guanylate cyclase domain-containing protein.	0.775
MNEG_0697	MNEG_4323	A0A0D2KAF1	A0A0D2JYL5	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	0.992
MNEG_0697	MNEG_8792	A0A0D2KAF1	A0A0D2KUY7	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit delta; Belongs to the chaperonin (HSP60) family.	0.992
MNEG_0697	MNEG_9399	A0A0D2KAF1	A0A0D2MW87	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit beta; Belongs to the TCP-1 chaperonin family.	0.983
MNEG_0697	MNEG_9658	A0A0D2KAF1	A0A0D2MBR2	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit beta.	0.994
MNEG_0697	MNEG_9659	A0A0D2KAF1	A0A0D2JFQ6	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	T-complex protein 1 subunit beta; Belongs to the TCP-1 chaperonin family.	0.998
MNEG_15223	MNEG_2921	A0A0D2LLS8	A0A0D2LED1	Thioredoxin domain-containing protein.	Guanylate cyclase domain-containing protein.	0.453
MNEG_1852	MNEG_2921	A0A0D2LI26	A0A0D2LED1	Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.	Guanylate cyclase domain-containing protein.	0.453
MNEG_1975	MNEG_0552	A0A0D2MTT9	A0A0D2KAY5	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Uncharacterized protein.	0.978
MNEG_1975	MNEG_0697	A0A0D2MTT9	A0A0D2KAF1	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	T-complex protein 1 subunit epsilon; Belongs to the TCP-1 chaperonin family.	0.992
MNEG_1975	MNEG_2921	A0A0D2MTT9	A0A0D2LED1	T-complex protein 1 subunit eta; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin.	Guanylate cyclase domain-containing protein.	0.686