STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_15089Uncharacterized protein. (340 aa)    
Predicted Functional Partners:
MNEG_6986
Skp1 domain-containing protein.
    
 0.883
MNEG_0264
SKP1-like protein 1A; Belongs to the SKP1 family.
    
 0.883
MNEG_4176
RING-box protein 1.
    
 0.876
MNEG_7296
Cullin 3; Belongs to the cullin family.
    
 0.812
MNEG_9347
Cullin-1; Belongs to the cullin family.
    
 0.812
MNEG_3746
Cullin_Nedd8 domain-containing protein.
    
 0.812
MNEG_1775
Serine/threonine-protein kinase plk-3.
    
 0.754
MNEG_7894
Large subunit ribosomal protein L40e.
    
  0.668
MNEG_15597
40S ribosomal protein S27a.
    
  0.636
MNEG_10085
Uncharacterized protein.
    
  0.636
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.