STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_16568Cysteinyl-tRNA synthetase. (215 aa)    
Predicted Functional Partners:
MNEG_2838
Uncharacterized protein.
  
  
 0.878
MNEG_14130
Methionyl-tRNA synthetase.
  
  
 0.767
MNEG_8341
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.767
MNEG_9538
N-acetylglucosaminylphosphatidylinositoldeacetylase.
  
 
 0.765
MNEG_15931
Dihydrofolate reductase.
     
 0.677
MNEG_14851
Leucyl-tRNA synthetase.
  
 
 0.610
MNEG_3661
Leucyl-tRNA synthetase.
  
 
 0.610
MNEG_1748
Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.610
MNEG_0179
Arg_tRNA_synt_N domain-containing protein.
  
 
 0.606
MNEG_15799
Leucyl-tRNA synthetase.
  
 
 0.601
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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