STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_14529Subunit of retromer complex. (309 aa)    
Predicted Functional Partners:
MNEG_2955
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
   
 
 0.723
MNEG_6746
Uncharacterized protein.
   
 
 0.588
MNEG_5666
Uncharacterized protein.
   
 
 0.588
MNEG_13528
Uncharacterized protein.
    
 
 0.581
MNEG_14084
Subunit of retromer complex.
    
 
 0.581
MNEG_5612
Protein of receptor mediated endocytosisfamily.
  
 
 
 0.578
MNEG_8570
Uncharacterized protein.
    
  0.530
MNEG_15254
Uncharacterized protein.
  
     0.510
MNEG_5742
Vacuolar-sorting receptor 2.
  
     0.482
MNEG_9855
Uncharacterized protein.
  
     0.478
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.