STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_16063Ldh_1_N domain-containing protein. (118 aa)    
Predicted Functional Partners:
MNEG_2180
Isocitrate lyase.
  
 0.919
MNEG_7619
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.847
MNEG_16552
Citrate synthase.
  
 0.846
MNEG_4939
Citrate synthase; Belongs to the citrate synthase family.
  
 0.846
MNEG_7157
Citrate synthase; Belongs to the citrate synthase family.
  
 0.836
MNEG_4308
Type II citrate synthase.
  
 0.836
MNEG_3550
Citrate synthase.
  
 0.836
MNEG_4439
NADH dehydrogenase (Ubiquinone) Fe-Sprotein 8.
  
 0.823
MNEG_10903
Succinyl-CoA synthetase alpha subunit.
  
 0.789
MNEG_14152
Succinyl-CoA synthetase alpha subunit.
  
 0.789
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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