STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MNEG_13800CDF transporter, membrane protein. (121 aa)    
Predicted Functional Partners:
MNEG_0941
Uncharacterized protein ycf36.
      
 0.600
MNEG_15314
Uncharacterized protein.
   
 
 0.531
MNEG_15686
J domain-containing protein.
   
 
 0.531
MNEG_0863
Metal tolerance protein C4.
  
 
 0.508
MNEG_3607
MYND-type domain-containing protein.
    
 
 0.442
MNEG_5369
Uncharacterized protein.
   
 
 0.431
MNEG_9292
Uncharacterized protein.
      
 0.426
MNEG_16169
Thioredoxin reductase (NADPH).
    
 0.424
MNEG_14294
Xylulose kinase.
  
    0.419
MNEG_10602
Putative La protein.
      
 0.406
Your Current Organism:
Monoraphidium neglectum
NCBI taxonomy Id: 145388
Other names: M. neglectum, Monoraphidium neglectum Heynig & Krienitz, SAG 48.87
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.